Occurrence

Plankton image dataset from a cabled observatory system (JEDI System/OCEANS) deployed at coastal area of Oshima island, Tokyo, Japan

Latest version published by National Museum of Nature and Science, Japan on 01 February 2024 National Museum of Nature and Science, Japan
Publication date:
01 February 2024
License:
CC-BY 4.0

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 320,647 records in English (10 MB) - Update frequency: unknown
Metadata as an EML file download in English (6 KB)
Metadata as an RTF file download in English (6 KB)

Description

To understand multiscale process of planktonic ecosystem in the Kuroshio, a cabled observatory system (JEDI-System/OCEANS) was developed and deployed at a coastal area (20 m depth) of Oshima Island,Tokyo, Japan, during 2014 to 2016 (Yamazaki et al., 2016). The observatory system can measure environmental parameters such as temperature and salinity, and take microscopic plankton images continuously. In this dataset, planktonic images obtained by the system were identified using machine learning with the validation process and compiled into DarwinCore occurrence records. All biological images and measured environmental parameters were archived at JST NBDC (https://dbarchive.biosciencedbc.jp/en/jedisystem-oceansdb/desc.html). H. Yamazaki, S. Gallager, M. Tanaka and K. Yamaguchi, "A cabled observatory system for integrated long term, high-frequency biological, chemical, physical measurement for understanding planktonic ecosystem," 2016 Techno-Ocean (Techno-Ocean), 2016, pp. 429-434, doi: 10.1109/Techno-Ocean.2016.7890692.

Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 320,647 records.

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Yamazaki, H. (2022) Plankton image dataset from a cabled observatory system (JEDI System/OCEANS) deployed at coastal area of Oshima island, Tokyo, Japan. Available at https://doi.org/10.48518/00014. Accessed on yyyy-mm-dd.

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is National Museum of Nature and Science, Japan. This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: 2b9b1484-431b-4dae-94bb-2259e6c1fdc6.  National Museum of Nature and Science, Japan publishes this resource, and is itself registered in GBIF as a data publisher endorsed by GBIF Japan.

Keywords

Occurrence; Occurrence

Contacts

Hidekatsu Yamasaki
  • Metadata Provider
  • Originator
  • Point Of Contact
Tokyo University of Marine Science and Technology
4-5-7 Konan
108-8477 Minato-ku
Tokyo
JP